CRISPRone

CRISPRone report for GCA_900146145.1_284

♦ Seq 1: FRON01000003.1 Pseudomonas aeruginosa isolate 284 genome assembly, contig: 284.NODE_3_length_35713_cov_54.252625, whole genome shotgun sequence

⇒Summary: seq-len = 35755 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8451-18963 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 8451-8969 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8451-8969 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9742-12423 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12426-13994 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 13991-14521 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14531-15673 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15675-16337 bp Gene: pfam08798:cas6e Type: other Location: 16312-16923 bp Gene: cd09719:cas1 Type: universal Location: 16950-17840 bp Gene: pfam09707:cas2 Type: universal Location: 17837-18136 bp CRISPR array Location: 18201-18963 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 18201-18963 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8451-8969 bp]: array | spacers
           [Locus range 18201-18963 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)