CRISPRone

CRISPRone report for GCA_900146165.1_286

♦ Seq 1: FROP01000029.1 Pseudomonas aeruginosa isolate 286 genome assembly, contig: 286.NODE_29_length_23109_cov_41.244839, whole genome shotgun sequence

⇒Summary: seq-len = 23163 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4202-14713 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 4202-4963 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 4202-4963 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 5028-5327 bp Gene: cd09719:cas1 Type: universal Location: 5324-6214 bp Gene: pfam08798:cas6e Type: other Location: 6241-6780 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 6827-7489 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 7491-8633 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 8643-9173 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 9170-10738 bp Gene: cd09641:cas3HD Type: Type-I Location: 10741-13422 bp CRISPR array Location: 14196-14713 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 14196-14713 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4202-4963 bp]: array | spacers
           [Locus range 14196-14713 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)