CRISPRone

CRISPRone report for GCA_900146175.1_288

♦ Seq 1: FROQ01000035.1 Pseudomonas aeruginosa isolate 288 genome assembly, contig: 288.NODE_43_length_51300_cov_47.548069, whole genome shotgun sequence

⇒Summary: seq-len = 51340 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8399-18911 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 8399-8917 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8399-8917 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9690-12371 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12374-13942 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 13939-14469 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14479-15621 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15623-16285 bp Gene: pfam08798:cas6e Type: other Location: 16260-16871 bp Gene: cd09719:cas1 Type: universal Location: 16898-17788 bp Gene: pfam09707:cas2 Type: universal Location: 17785-18084 bp CRISPR array Location: 18149-18911 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 18149-18911 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8399-8917 bp]: array | spacers
           [Locus range 18149-18911 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)