CRISPRone

CRISPRone report for GCA_900146185.1_287

♦ Seq 1: FROO01000005.1 Pseudomonas aeruginosa isolate 287 genome assembly, contig: 287.NODE_5_length_159547_cov_34.923332, whole genome shotgun sequence

⇒Summary: seq-len = 159591 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16793-27304 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 16793-17554 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 16793-17554 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 17619-17918 bp Gene: cd09719:cas1 Type: universal Location: 17915-18805 bp Gene: pfam08798:cas6e Type: other Location: 18832-19371 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 19418-20080 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 20082-21224 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 21234-21764 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 21761-23329 bp Gene: cd09641:cas3HD Type: Type-I Location: 23332-26013 bp CRISPR array Location: 26787-27304 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 26787-27304 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 16793-17554 bp]: array | spacers
           [Locus range 26787-27304 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)