CRISPRone

CRISPRone report for GCA_900146195.1_289

♦ Seq 1: FROR01000070.1 Pseudomonas aeruginosa isolate 289 genome assembly, contig: 289.NODE_74_length_35675_cov_43.103714, whole genome shotgun sequence

⇒Summary: seq-len = 35727 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8422-18934 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 8422-8940 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8422-8940 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9713-12394 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12397-13965 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 13962-14492 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14502-15644 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15646-16308 bp Gene: pfam08798:cas6e Type: other Location: 16283-16894 bp Gene: cd09719:cas1 Type: universal Location: 16921-17811 bp Gene: pfam09707:cas2 Type: universal Location: 17808-18107 bp CRISPR array Location: 18172-18934 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 18172-18934 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8422-8940 bp]: array | spacers
           [Locus range 18172-18934 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)