CRISPRone

CRISPRone report for GCA_900146205.1_290

♦ Seq 1: FROU01000020.1 Pseudomonas aeruginosa isolate 290 genome assembly, contig: 290.NODE_20_length_35730_cov_47.883430, whole genome shotgun sequence

⇒Summary: seq-len = 35784 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16827-27338 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 16827-17588 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 16827-17588 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 17653-17952 bp Gene: cd09719:cas1 Type: universal Location: 17949-18839 bp Gene: pfam08798:cas6e Type: other Location: 18866-19405 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 19452-20114 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 20116-21258 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 21268-21798 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 21795-23363 bp Gene: cd09641:cas3HD Type: Type-I Location: 23366-26047 bp CRISPR array Location: 26821-27338 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 26821-27338 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 16827-17588 bp]: array | spacers
           [Locus range 26821-27338 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)