CRISPRone

CRISPRone report for GCA_900146215.1_292

♦ Seq 1: FROT01000008.1 Pseudomonas aeruginosa isolate 292 genome assembly, contig: 292.NODE_10_length_35732_cov_47.631927, whole genome shotgun sequence

⇒Summary: seq-len = 35784 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8481-18993 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 8481-8999 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8481-8999 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9772-12453 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12456-14024 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 14021-14551 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14561-15703 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15705-16367 bp Gene: pfam08798:cas6e Type: other Location: 16342-16953 bp Gene: cd09719:cas1 Type: universal Location: 16980-17870 bp Gene: pfam09707:cas2 Type: universal Location: 17867-18166 bp CRISPR array Location: 18231-18993 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 18231-18993 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8481-8999 bp]: array | spacers
           [Locus range 18231-18993 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)