CRISPRone

CRISPRone report for GCA_900146225.1_291

♦ Seq 1: FROS01000061.1 Pseudomonas aeruginosa isolate 291 genome assembly, contig: 291.NODE_65_length_51322_cov_52.359650, whole genome shotgun sequence

⇒Summary: seq-len = 51368 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32423-42934 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 32423-33184 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 32423-33184 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 33249-33548 bp Gene: cd09719:cas1 Type: universal Location: 33545-34435 bp Gene: pfam08798:cas6e Type: other Location: 34462-35001 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 35048-35710 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 35712-36854 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 36864-37394 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 37391-38959 bp Gene: cd09641:cas3HD Type: Type-I Location: 38962-41643 bp CRISPR array Location: 42417-42934 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 42417-42934 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 32423-33184 bp]: array | spacers
           [Locus range 42417-42934 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)