CRISPRone

CRISPRone report for GCA_900146265.1_296

♦ Seq 1: FROY01000066.1 Pseudomonas aeruginosa isolate 296 genome assembly, contig: 296.NODE_103_length_36381_cov_50.780354, whole genome shotgun sequence

⇒Summary: seq-len = 36419 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 254-10853 bp Zoom in on locus 1 x10 x19 CRISPR array Location: 254-822 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 254-822 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1073-2047 bp Gene: COG1203:cas3 Type: Type-I Location: 2044-5274 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5685-6986 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6973-7956 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7967-8995 bp Gene: cd09739:cas6f Type: other Location: 8999-9562 bp CRISPR array Location: 9746-10853 bp Num of repeats: 19 Spacers: s10-s27 CRISPR array Location: 9746-10853 bp Num of repeats: 19 Spacers: s10-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 254-822 bp]: array | spacers
           [Locus range 9746-10853 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FROY01000071.1 Pseudomonas aeruginosa isolate 296 genome assembly, contig: 296.NODE_119_length_208835_cov_49.035847, whole genome shotgun sequence

⇒Summary: seq-len = 208873 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207870-208618 bp Zoom in on locus 1 x13 CRISPR array Location: 207870-208618 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 207870-208618 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207870-208618 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)