CRISPRone

CRISPRone report for GCA_900146275.1_297

♦ Seq 1: FROZ01000074.1 Pseudomonas aeruginosa isolate 297 genome assembly, contig: 297.NODE_86_length_121653_cov_35.688251, whole genome shotgun sequence

⇒Summary: seq-len = 121709 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120688-121436 bp Zoom in on locus 1 x13 CRISPR array Location: 120688-121436 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 120688-121436 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 120688-121436 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FROZ01000104.1 Pseudomonas aeruginosa isolate 297 genome assembly, contig: 297.NODE_131_length_39324_cov_34.745319, whole genome shotgun sequence

⇒Summary: seq-len = 39380 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34357-39378 bp Zoom in on locus 1 x19 CRISPR array Location: 34357-35465 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 34357-35465 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 35648-36211 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 36215-37243 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 37254-38237 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38224-39378 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34357-35465 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FROZ01000041.1 Pseudomonas aeruginosa isolate 297 genome assembly, contig: 297.NODE_48_length_5838_cov_35.013359, whole genome shotgun sequence

⇒Summary: seq-len = 5894 bp; # of CRISPR array = 1; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 272-5891 bp Zoom in on locus 1 x10 CRISPR array Location: 272-840 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 272-840 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1091-2065 bp Gene: COG1203:cas3 Type: Type-I Location: 2062-5292 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5703-5891 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 272-840 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)