CRISPRone

CRISPRone report for GCA_900146315.1_301

♦ Seq 1: FRPD01000072.1 Pseudomonas aeruginosa isolate 301 genome assembly, contig: 301.NODE_86_length_121483_cov_41.696873, whole genome shotgun sequence

⇒Summary: seq-len = 121533 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 268-1017 bp Zoom in on locus 1 x13 CRISPR array Location: 268-1017 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 268-1017 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 268-1017 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRPD01000007.1 Pseudomonas aeruginosa isolate 301 genome assembly, contig: 301.NODE_7_length_27881_cov_42.499947, whole genome shotgun sequence

⇒Summary: seq-len = 27931 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-2365 bp Zoom in on locus 1 x19 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1-507 bp Gene: cd09739:cas6f Type: other Location: 511-1074 bp CRISPR array Location: 1258-2365 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1258-2365 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1258-2365 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRPD01000101.1 Pseudomonas aeruginosa isolate 301 genome assembly, contig: 301.NODE_133_length_8491_cov_39.788834, whole genome shotgun sequence

⇒Summary: seq-len = 8541 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-8276 bp Zoom in on locus 1 x10 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3-563 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 574-1557 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1544-2845 bp Gene: COG1203:cas3 Type: Type-I Location: 3256-6486 bp Gene: cd09718:cas1 Type: universal Location: 6483-7457 bp CRISPR array Location: 7709-8276 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 7709-8276 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 7709-8276 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)