CRISPRone

CRISPRone report for GCA_900146325.1_302

♦ Seq 1: FRPE01000051.1 Pseudomonas aeruginosa isolate 302 genome assembly, contig: 302.NODE_55_length_6220_cov_33.999680, whole genome shotgun sequence

⇒Summary: seq-len = 6274 bp; # of CRISPR array = 1; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-6005 bp Zoom in on locus 1 x10 Gene: cd09735:cas8f Type: Subtype-I-F Location: 2-574 bp Gene: COG1203:cas3 Type: Type-I Location: 985-4215 bp Gene: cd09718:cas1 Type: universal Location: 4212-5186 bp CRISPR array Location: 5438-6005 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 5438-6005 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5438-6005 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRPE01000028.1 Pseudomonas aeruginosa isolate 302 genome assembly, contig: 302.NODE_32_length_30188_cov_35.635155, whole genome shotgun sequence

⇒Summary: seq-len = 30242 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-4645 bp Zoom in on locus 1 x19 Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2-778 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 765-1748 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1759-2787 bp Gene: cd09739:cas6f Type: other Location: 2791-3354 bp CRISPR array Location: 3538-4645 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 3538-4645 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3538-4645 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRPE01000032.1 Pseudomonas aeruginosa isolate 302 genome assembly, contig: 302.NODE_36_length_162462_cov_36.578030, whole genome shotgun sequence

⇒Summary: seq-len = 162516 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 161497-162245 bp Zoom in on locus 1 x13 CRISPR array Location: 161497-162245 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 161497-162245 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 161497-162245 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)