CRISPRone

CRISPRone report for GCA_900146335.1_303

♦ Seq 1: FRPF01000086.1 Pseudomonas aeruginosa isolate 303 genome assembly, contig: 303.NODE_114_length_8486_cov_33.033230, whole genome shotgun sequence

⇒Summary: seq-len = 8534 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-8271 bp Zoom in on locus 1 x10 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1-558 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 569-1552 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1539-2840 bp Gene: COG1203:cas3 Type: Type-I Location: 3251-6481 bp Gene: cd09718:cas1 Type: universal Location: 6478-7452 bp CRISPR array Location: 7704-8271 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 7704-8271 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 7704-8271 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRPF01000119.1 Pseudomonas aeruginosa isolate 303 genome assembly, contig: 303.NODE_209_length_40460_cov_34.441029, whole genome shotgun sequence

⇒Summary: seq-len = 40508 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-2365 bp Zoom in on locus 1 x19 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1-507 bp Gene: cd09739:cas6f Type: other Location: 511-1074 bp CRISPR array Location: 1258-2365 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1258-2365 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1258-2365 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRPF01000088.1 Pseudomonas aeruginosa isolate 303 genome assembly, contig: 303.NODE_118_length_162258_cov_35.296268, whole genome shotgun sequence

⇒Summary: seq-len = 162306 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 161293-162041 bp Zoom in on locus 1 x13 CRISPR array Location: 161293-162041 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 161293-162041 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 161293-162041 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)