CRISPRone

CRISPRone report for GCA_900146345.1_304

♦ Seq 1: FRPG01000059.1 Pseudomonas aeruginosa isolate 304 genome assembly, contig: 304.NODE_86_length_209063_cov_45.081478, whole genome shotgun sequence

⇒Summary: seq-len = 209113 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 268-1017 bp Zoom in on locus 1 x13 CRISPR array Location: 268-1017 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 268-1017 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 268-1017 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRPG01000078.1 Pseudomonas aeruginosa isolate 304 genome assembly, contig: 304.NODE_135_length_48960_cov_42.976490, whole genome shotgun sequence

⇒Summary: seq-len = 49010 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 266-10865 bp Zoom in on locus 1 x10 x19 CRISPR array Location: 266-834 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 266-834 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1085-2059 bp Gene: COG1203:cas3 Type: Type-I Location: 2056-5286 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5697-6998 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6985-7968 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7979-9007 bp Gene: cd09739:cas6f Type: other Location: 9011-9574 bp CRISPR array Location: 9758-10865 bp Num of repeats: 19 Spacers: s10-s27 CRISPR array Location: 9758-10865 bp Num of repeats: 19 Spacers: s10-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 266-834 bp]: array | spacers
           [Locus range 9758-10865 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)