CRISPRone

CRISPRone report for GCA_900146365.1_305

♦ Seq 1: FRPI01000070.1 Pseudomonas aeruginosa isolate 305 genome assembly, contig: 305.NODE_78_length_25552_cov_32.843300, whole genome shotgun sequence

⇒Summary: seq-len = 25608 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 596-5616 bp Zoom in on locus 1 x10 Gene: COG1203:cas3 Type: Type-I Location: 596-3826 bp Gene: cd09718:cas1 Type: universal Location: 3823-4797 bp CRISPR array Location: 5049-5616 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 5049-5616 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5049-5616 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRPI01000101.1 Pseudomonas aeruginosa isolate 305 genome assembly, contig: 305.NODE_136_length_2276_cov_31.066784, whole genome shotgun sequence

⇒Summary: seq-len = 2332 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-2329 bp Zoom in on locus 1 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3-182 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 193-1176 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1163-2329 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRPI01000075.1 Pseudomonas aeruginosa isolate 305 genome assembly, contig: 305.NODE_84_length_28264_cov_35.472118, whole genome shotgun sequence

⇒Summary: seq-len = 28320 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25566-28317 bp Zoom in on locus 1 x19 CRISPR array Location: 25566-26674 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 25566-26674 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 26857-27420 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 27424-28317 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25566-26674 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FRPI01000023.1 Pseudomonas aeruginosa isolate 305 genome assembly, contig: 305.NODE_23_length_351764_cov_36.638969, whole genome shotgun sequence

⇒Summary: seq-len = 351820 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120515-121263 bp Zoom in on locus 1 x13 CRISPR array Location: 120515-121263 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 120515-121263 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 120515-121263 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)