CRISPRone

CRISPRone report for GCA_900146375.1_307

♦ Seq 1: FRPJ01000051.1 Pseudomonas aeruginosa isolate 307 genome assembly, contig: 307.NODE_66_length_45189_cov_44.592068, whole genome shotgun sequence

⇒Summary: seq-len = 45239 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 266-10865 bp Zoom in on locus 1 x10 x19 CRISPR array Location: 266-834 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 266-834 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1085-2059 bp Gene: COG1203:cas3 Type: Type-I Location: 2056-5286 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5697-6998 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6985-7968 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7979-9007 bp Gene: cd09739:cas6f Type: other Location: 9011-9574 bp CRISPR array Location: 9758-10865 bp Num of repeats: 19 Spacers: s10-s27 CRISPR array Location: 9758-10865 bp Num of repeats: 19 Spacers: s10-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 266-834 bp]: array | spacers
           [Locus range 9758-10865 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRPJ01000065.1 Pseudomonas aeruginosa isolate 307 genome assembly, contig: 307.NODE_85_length_162141_cov_44.964748, whole genome shotgun sequence

⇒Summary: seq-len = 162191 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 161176-161924 bp Zoom in on locus 1 x13 CRISPR array Location: 161176-161924 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 161176-161924 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 161176-161924 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)