CRISPRone

CRISPRone report for GCA_900146545.1_325

♦ Seq 1: FRQA01000039.1 Pseudomonas aeruginosa isolate 325 genome assembly, contig: 325.NODE_47_length_23150_cov_37.841038, whole genome shotgun sequence

⇒Summary: seq-len = 23208 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8492-19004 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 8492-9010 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8492-9010 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9783-12464 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12467-14035 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 14032-14562 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14572-15714 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15716-16378 bp Gene: pfam08798:cas6e Type: other Location: 16353-16964 bp Gene: cd09719:cas1 Type: universal Location: 16991-17881 bp Gene: pfam09707:cas2 Type: universal Location: 17878-18177 bp CRISPR array Location: 18242-19004 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 18242-19004 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8492-9010 bp]: array | spacers
           [Locus range 18242-19004 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)