CRISPRone

CRISPRone report for GCA_900146605.1_329

♦ Seq 1: FRQE01000026.1 Pseudomonas aeruginosa isolate 329 genome assembly, contig: 329.NODE_27_length_116646_cov_40.952000, whole genome shotgun sequence

⇒Summary: seq-len = 116700 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 97725-108236 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 97725-98486 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 97725-98486 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 98551-98850 bp Gene: cd09719:cas1 Type: universal Location: 98847-99737 bp Gene: pfam08798:cas6e Type: other Location: 99764-100303 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 100350-101012 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 101014-102156 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 102166-102696 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 102693-104261 bp Gene: cd09641:cas3HD Type: Type-I Location: 104264-106945 bp CRISPR array Location: 107719-108236 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 107719-108236 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 97725-98486 bp]: array | spacers
           [Locus range 107719-108236 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)