CRISPRone

CRISPRone report for GCA_900146715.1_343

♦ Seq 1: FRQQ01000002.1 Pseudomonas aeruginosa isolate 343 genome assembly, contig: 343.NODE_2_length_190155_cov_28.776541, whole genome shotgun sequence

⇒Summary: seq-len = 190217 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 147089-157533 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 147089-148197 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 147089-148197 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 148457-149431 bp Gene: COG1203:cas3 Type: Type-I Location: 149428-152658 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 152716-154020 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 154007-154990 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 155001-156029 bp Gene: cd09739:cas6f Type: other Location: 156033-156596 bp CRISPR array Location: 156846-157533 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 156846-157533 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 147089-148197 bp]: array | spacers
           [Locus range 156846-157533 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)