CRISPRone

CRISPRone report for GCA_900146735.1_345

♦ Seq 1: FRQS01000044.1 Pseudomonas aeruginosa isolate 345 genome assembly, contig: 345.NODE_67_length_80090_cov_47.032814, whole genome shotgun sequence

⇒Summary: seq-len = 80140 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36664-47108 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 36664-37352 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 36664-37352 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37601-38164 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38168-39196 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39207-40190 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40177-41481 bp Gene: COG1203:cas3 Type: Type-I Location: 41539-44769 bp Gene: cd09718:cas1 Type: universal Location: 44766-45740 bp CRISPR array Location: 46001-47108 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 46001-47108 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36664-37352 bp]: array | spacers
           [Locus range 46001-47108 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)