CRISPRone

CRISPRone report for GCA_900146745.1_346

♦ Seq 1: FRQT01000038.1 Pseudomonas aeruginosa isolate 346 genome assembly, contig: 346.NODE_84_length_80227_cov_39.917759, whole genome shotgun sequence

⇒Summary: seq-len = 80287 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36743-47187 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 36743-37431 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 36743-37431 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37680-38243 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38247-39275 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39286-40269 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40256-41560 bp Gene: COG1203:cas3 Type: Type-I Location: 41618-44848 bp Gene: cd09718:cas1 Type: universal Location: 44845-45819 bp CRISPR array Location: 46080-47187 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 46080-47187 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36743-37431 bp]: array | spacers
           [Locus range 46080-47187 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)