CRISPRone

CRISPRone report for GCA_900146755.1_347

♦ Seq 1: FRQU01000030.1 Pseudomonas aeruginosa isolate 347 genome assembly, contig: 347.NODE_44_length_210377_cov_41.443230, whole genome shotgun sequence

⇒Summary: seq-len = 210431 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 163455-173899 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 163455-164563 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 163455-164563 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 164823-165797 bp Gene: COG1203:cas3 Type: Type-I Location: 165794-169024 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 169082-170386 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 170373-171356 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 171367-172395 bp Gene: cd09739:cas6f Type: other Location: 172399-172962 bp CRISPR array Location: 173212-173899 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 173212-173899 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 163455-164563 bp]: array | spacers
           [Locus range 173212-173899 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)