CRISPRone

CRISPRone report for GCA_900146785.1_351

♦ Seq 1: FRQX01000003.1 Pseudomonas aeruginosa isolate 351 genome assembly, contig: 351.NODE_3_length_232300_cov_44.843700, whole genome shotgun sequence

⇒Summary: seq-len = 232350 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182541-194168 bp Zoom in on locus 1 x19 x27 CRISPR array Location: 182541-183650 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 182541-183650 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 183910-184884 bp Gene: COG1203:cas3 Type: Type-I Location: 184881-188111 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 188522-189823 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 189810-190793 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 190804-191832 bp Gene: cd09739:cas6f Type: other Location: 191836-192399 bp CRISPR array Location: 192584-194168 bp Num of repeats: 27 Spacers: s19-s44 CRISPR array Location: 192584-194168 bp Num of repeats: 27 Spacers: s19-s44 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182541-183650 bp]: array | spacers
           [Locus range 192584-194168 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRQX01000044.1 Pseudomonas aeruginosa isolate 351 genome assembly, contig: 351.NODE_85_length_493282_cov_45.732819, whole genome shotgun sequence

⇒Summary: seq-len = 493332 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 285445-286074 bp Zoom in on locus 1 x11 CRISPR array Location: 285445-286074 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 285445-286074 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 285445-286074 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)