CRISPRone

CRISPRone report for GCA_900146795.1_352

♦ Seq 1: FRRA01000031.1 Pseudomonas aeruginosa isolate 352 genome assembly, contig: 352.NODE_104_length_702891_cov_42.240807, whole genome shotgun sequence

⇒Summary: seq-len = 702949 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 495054-495683 bp Zoom in on locus 1 x11 CRISPR array Location: 495054-495683 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 495054-495683 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 495054-495683 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRRA01000088.1 Pseudomonas aeruginosa isolate 352 genome assembly, contig: 352.NODE_316_length_232308_cov_39.085976, whole genome shotgun sequence

⇒Summary: seq-len = 232366 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182549-194176 bp Zoom in on locus 1 x19 x27 CRISPR array Location: 182549-183658 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 182549-183658 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 183918-184892 bp Gene: COG1203:cas3 Type: Type-I Location: 184889-188119 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 188530-189831 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 189818-190801 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 190812-191840 bp Gene: cd09739:cas6f Type: other Location: 191844-192407 bp CRISPR array Location: 192592-194176 bp Num of repeats: 27 Spacers: s19-s44 CRISPR array Location: 192592-194176 bp Num of repeats: 27 Spacers: s19-s44 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182549-183658 bp]: array | spacers
           [Locus range 192592-194176 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)