CRISPRone

CRISPRone report for GCA_900146805.1_353

♦ Seq 1: FRQZ01000007.1 Pseudomonas aeruginosa isolate 353 genome assembly, contig: 353.NODE_9_length_702662_cov_45.320637, whole genome shotgun sequence

⇒Summary: seq-len = 702714 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 494825-495454 bp Zoom in on locus 1 x11 CRISPR array Location: 494825-495454 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 494825-495454 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 494825-495454 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRQZ01000035.1 Pseudomonas aeruginosa isolate 353 genome assembly, contig: 353.NODE_53_length_197429_cov_44.190609, whole genome shotgun sequence

⇒Summary: seq-len = 197481 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38185-49812 bp Zoom in on locus 1 x27 x19 CRISPR array Location: 38185-39770 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 38185-39770 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 39954-40517 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40521-41549 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41560-42543 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42530-43831 bp Gene: COG1203:cas3 Type: Type-I Location: 44242-47472 bp Gene: cd09718:cas1 Type: universal Location: 47469-48443 bp CRISPR array Location: 48704-49812 bp Num of repeats: 19 Spacers: s27-s44 CRISPR array Location: 48704-49812 bp Num of repeats: 19 Spacers: s27-s44 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38185-39770 bp]: array | spacers
           [Locus range 48704-49812 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)