CRISPRone

CRISPRone report for GCA_900146815.1_354

♦ Seq 1: FRRB01000016.1 Pseudomonas aeruginosa isolate 354 genome assembly, contig: 354.NODE_26_length_232312_cov_37.714527, whole genome shotgun sequence

⇒Summary: seq-len = 232374 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38195-49822 bp Zoom in on locus 1 x27 x19 CRISPR array Location: 38195-39780 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 38195-39780 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 39964-40527 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40531-41559 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41570-42553 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42540-43841 bp Gene: COG1203:cas3 Type: Type-I Location: 44252-47482 bp Gene: cd09718:cas1 Type: universal Location: 47479-48453 bp CRISPR array Location: 48714-49822 bp Num of repeats: 19 Spacers: s27-s44 CRISPR array Location: 48714-49822 bp Num of repeats: 19 Spacers: s27-s44 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38195-39780 bp]: array | spacers
           [Locus range 48714-49822 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRRB01000042.1 Pseudomonas aeruginosa isolate 354 genome assembly, contig: 354.NODE_88_length_703442_cov_38.672794, whole genome shotgun sequence

⇒Summary: seq-len = 703504 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207819-208447 bp Zoom in on locus 1 x11 CRISPR array Location: 207819-208447 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 207819-208447 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207819-208447 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)