CRISPRone

CRISPRone report for GCA_900146825.1_355

♦ Seq 1: FRRC01000039.1 Pseudomonas aeruginosa isolate 355 genome assembly, contig: 355.NODE_58_length_507544_cov_49.105156, whole genome shotgun sequence

⇒Summary: seq-len = 507600 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10776-11043 bp Zoom in on locus 1 x5 CRISPR array Location: 10776-11043 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 10776-11043 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 10776-11043 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRRC01000058.1 Pseudomonas aeruginosa isolate 355 genome assembly, contig: 355.NODE_112_length_82235_cov_46.752380, whole genome shotgun sequence

⇒Summary: seq-len = 82291 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33995-44606 bp Zoom in on locus 1 x9 x26 CRISPR array Location: 33995-34503 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 33995-34503 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09718:cas1 Type: universal Location: 34754-35728 bp Gene: COG1203:cas3 Type: Type-I Location: 35725-38955 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39013-40317 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40304-41287 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41298-42326 bp Gene: cd09739:cas6f Type: other Location: 42330-42893 bp CRISPR array Location: 43077-44606 bp Num of repeats: 26 Spacers: s9-s33 CRISPR array Location: 43077-44606 bp Num of repeats: 26 Spacers: s9-s33 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33995-34503 bp]: array | spacers
           [Locus range 43077-44606 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)