CRISPRone

CRISPRone report for GCA_900146845.1_357

♦ Seq 1: FRRE01000031.1 Pseudomonas aeruginosa isolate 357 genome assembly, contig: 357.NODE_58_length_571348_cov_41.956959, whole genome shotgun sequence

⇒Summary: seq-len = 571404 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 288230-298587 bp Zoom in on locus 1 x12 x17 CRISPR array Location: 288230-288930 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 288230-288930 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 289702-292383 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 292386-293954 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 293951-294481 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 294491-295633 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 295635-296297 bp Gene: pfam08798:cas6e Type: other Location: 296272-296883 bp Gene: cd09719:cas1 Type: universal Location: 296910-297221 bp Gene: pfam09707:cas2 Type: universal Location: 297218-297517 bp CRISPR array Location: 297582-298587 bp Num of repeats: 17 Spacers: s12-s27 CRISPR array Location: 297582-298587 bp Num of repeats: 17 Spacers: s12-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 288230-288930 bp]: array | spacers
           [Locus range 297582-298587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRRE01000034.1 Pseudomonas aeruginosa isolate 357 genome assembly, contig: 357.NODE_67_length_73599_cov_41.914509, whole genome shotgun sequence

⇒Summary: seq-len = 73655 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37486-48406 bp Zoom in on locus 1 x20 x20 CRISPR array Location: 37486-38654 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 37486-38654 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09739:cas6f Type: other Location: 38837-39400 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39404-40432 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40443-41426 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41413-42717 bp Gene: COG1203:cas3 Type: Type-I Location: 42775-46005 bp Gene: cd09718:cas1 Type: universal Location: 46002-46976 bp CRISPR array Location: 47237-48406 bp Num of repeats: 20 Spacers: s20-s38 CRISPR array Location: 47237-48406 bp Num of repeats: 20 Spacers: s20-s38 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37486-38654 bp]: array | spacers
           [Locus range 47237-48406 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)