CRISPRone

CRISPRone report for GCA_900147195.1_391

♦ Seq 1: FRSL01000033.1 Pseudomonas aeruginosa isolate 391 genome assembly, contig: 391.NODE_34_length_56119_cov_37.455051, whole genome shotgun sequence

⇒Summary: seq-len = 56181 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25584-36183 bp Zoom in on locus 1 x19 x10 CRISPR array Location: 25584-26692 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 25584-26692 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 26875-27438 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 27442-28470 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28481-29464 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 29451-30752 bp Gene: COG1203:cas3 Type: Type-I Location: 31163-34393 bp Gene: cd09718:cas1 Type: universal Location: 34390-35364 bp CRISPR array Location: 35616-36183 bp Num of repeats: 10 Spacers: s19-s27 CRISPR array Location: 35616-36183 bp Num of repeats: 10 Spacers: s19-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25584-26692 bp]: array | spacers
           [Locus range 35616-36183 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRSL01000006.1 Pseudomonas aeruginosa isolate 391 genome assembly, contig: 391.NODE_6_length_444473_cov_38.288773, whole genome shotgun sequence

⇒Summary: seq-len = 444535 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120510-121258 bp Zoom in on locus 1 x13 CRISPR array Location: 120510-121258 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 120510-121258 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 120510-121258 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)