CRISPRone

CRISPRone report for GCA_900147205.1_394

♦ Seq 1: FRSO01000096.1 Pseudomonas aeruginosa isolate 394 genome assembly, contig: 394.NODE_110_length_210543_cov_46.561577, whole genome shotgun sequence

⇒Summary: seq-len = 210599 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 192473-193821 bp Zoom in on locus 1 x23 CRISPR array Location: 192473-193821 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 192473-193821 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 192473-193821 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRSO01000038.1 Pseudomonas aeruginosa isolate 394 genome assembly, contig: 394.NODE_44_length_97401_cov_49.902618, whole genome shotgun sequence

⇒Summary: seq-len = 97457 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14726-35166 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 14726-15610 bp Gene: unk Type: unknown Location: 15675-15965 bp Gene: unk Type: unknown Location: 16121-16753 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 16786-18108 bp Gene: pfam13280:WYL Type: other Location: 26955-27947 bp Gene: pfam13280:WYL Type: other Location: 34291-35166 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRSO01000062.1 Pseudomonas aeruginosa isolate 394 genome assembly, contig: 394.NODE_73_length_85594_cov_45.616585, whole genome shotgun sequence

⇒Summary: seq-len = 85650 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 49734-59813 bp Zoom in on locus 1 x14 x12 CRISPR array Location: 49734-50542 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 49734-50542 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09718:cas1 Type: universal Location: 50802-51776 bp Gene: COG1203:cas3 Type: Type-I Location: 51773-55003 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 55061-56365 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 56352-57335 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 57346-58374 bp Gene: cd09739:cas6f Type: other Location: 58378-58941 bp CRISPR array Location: 59125-59813 bp Num of repeats: 12 Spacers: s14-s24 CRISPR array Location: 59125-59813 bp Num of repeats: 12 Spacers: s14-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 49734-50542 bp]: array | spacers
           [Locus range 59125-59813 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)