CRISPRone

CRISPRone report for GCA_900147215.1_395

♦ Seq 1: FRSR01000052.1 Pseudomonas aeruginosa isolate 395 genome assembly, contig: 395.NODE_53_length_97410_cov_66.096428, whole genome shotgun sequence

⇒Summary: seq-len = 97458 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62292-82732 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 62292-63167 bp Gene: pfam13280:WYL Type: other Location: 69511-70503 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 79350-80636 bp Gene: unk Type: unknown Location: 80705-81337 bp Gene: unk Type: unknown Location: 81493-81783 bp Gene: pfam13280:WYL Type: other Location: 81848-82732 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRSR01000245.1 Pseudomonas aeruginosa isolate 395 genome assembly, contig: 395.NODE_298_length_134811_cov_58.673447, whole genome shotgun sequence

⇒Summary: seq-len = 134859 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 117614-118962 bp Zoom in on locus 1 x23 CRISPR array Location: 117614-118962 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 117614-118962 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 117614-118962 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRSR01000105.1 Pseudomonas aeruginosa isolate 395 genome assembly, contig: 395.NODE_111_length_85500_cov_57.040421, whole genome shotgun sequence

⇒Summary: seq-len = 85548 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25838-35917 bp Zoom in on locus 1 x12 x14 CRISPR array Location: 25838-26527 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 25838-26527 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 26710-27273 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 27277-28305 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28316-29299 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 29286-30590 bp Gene: COG1203:cas3 Type: Type-I Location: 30648-33878 bp Gene: cd09718:cas1 Type: universal Location: 33875-34849 bp CRISPR array Location: 35110-35917 bp Num of repeats: 14 Spacers: s12-s24 CRISPR array Location: 35110-35917 bp Num of repeats: 14 Spacers: s12-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25838-26527 bp]: array | spacers
           [Locus range 35110-35917 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)