CRISPRone

CRISPRone report for GCA_900147235.1_397

♦ Seq 1: FRSS01000171.1 Pseudomonas aeruginosa isolate 397 genome assembly, contig: 397.NODE_199_length_37856_cov_40.529480, whole genome shotgun sequence

⇒Summary: seq-len = 37910 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19053-29625 bp Zoom in on locus 1 x14 x9 CRISPR array Location: 19053-19875 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 19053-19875 bp Num of repeats: 14 Spacers: s1-s13 Gene: pfam09707:cas2 Type: universal Location: 19940-20239 bp Gene: cd09719:cas1 Type: universal Location: 20236-21126 bp Gene: pfam08798:cas6e Type: other Location: 21153-21692 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 21739-22401 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 22403-23545 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 23555-24085 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 24082-25650 bp Gene: cd09641:cas3HD Type: Type-I Location: 25653-28334 bp CRISPR array Location: 29108-29625 bp Num of repeats: 9 Spacers: s14-s21 CRISPR array Location: 29108-29625 bp Num of repeats: 9 Spacers: s14-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 19053-19875 bp]: array | spacers
           [Locus range 29108-29625 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)