CRISPRone

CRISPRone report for GCA_900147265.1_399

♦ Seq 1: FRST01000007.1 Pseudomonas aeruginosa isolate 399 genome assembly, contig: 399.NODE_7_length_28524_cov_37.747791, whole genome shotgun sequence

⇒Summary: seq-len = 28584 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5852-16425 bp Zoom in on locus 1 x9 x14 CRISPR array Location: 5852-6370 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 5852-6370 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 7143-9824 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 9827-11395 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 11392-11922 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 11932-13074 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 13076-13738 bp Gene: pfam08798:cas6e Type: other Location: 13713-14324 bp Gene: cd09719:cas1 Type: universal Location: 14351-15241 bp Gene: pfam09707:cas2 Type: universal Location: 15238-15537 bp CRISPR array Location: 15602-16425 bp Num of repeats: 14 Spacers: s9-s21 CRISPR array Location: 15602-16425 bp Num of repeats: 14 Spacers: s9-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5852-6370 bp]: array | spacers
           [Locus range 15602-16425 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)