CRISPRone

CRISPRone report for GCA_900147285.1_402

♦ Seq 1: FRSW01000169.1 Pseudomonas aeruginosa isolate 402 genome assembly, contig: 402.NODE_189_length_30914_cov_34.430325, whole genome shotgun sequence

⇒Summary: seq-len = 30976 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8265-18838 bp Zoom in on locus 1 x9 x14 CRISPR array Location: 8265-8783 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8265-8783 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9556-12237 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12240-13808 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 13805-14335 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14345-15487 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15489-16151 bp Gene: pfam08798:cas6e Type: other Location: 16126-16737 bp Gene: cd09719:cas1 Type: universal Location: 16764-17654 bp Gene: pfam09707:cas2 Type: universal Location: 17651-17950 bp CRISPR array Location: 18015-18838 bp Num of repeats: 14 Spacers: s9-s21 CRISPR array Location: 18015-18838 bp Num of repeats: 14 Spacers: s9-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8265-8783 bp]: array | spacers
           [Locus range 18015-18838 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)