CRISPRone

CRISPRone report for GCA_900147295.1_403

♦ Seq 1: FRSX01000234.1 Pseudomonas aeruginosa isolate 403 genome assembly, contig: 403.NODE_280_length_46483_cov_39.952843, whole genome shotgun sequence

⇒Summary: seq-len = 46531 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8277-18850 bp Zoom in on locus 1 x9 x14 CRISPR array Location: 8277-8795 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8277-8795 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9568-12249 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12252-13820 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 13817-14347 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14357-15499 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15501-16163 bp Gene: pfam08798:cas6e Type: other Location: 16138-16749 bp Gene: cd09719:cas1 Type: universal Location: 16776-17666 bp Gene: pfam09707:cas2 Type: universal Location: 17663-17962 bp CRISPR array Location: 18027-18850 bp Num of repeats: 14 Spacers: s9-s21 CRISPR array Location: 18027-18850 bp Num of repeats: 14 Spacers: s9-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8277-8795 bp]: array | spacers
           [Locus range 18027-18850 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)