CRISPRone

CRISPRone report for GCA_900147335.1_408

♦ Seq 1: FRTB01000147.1 Pseudomonas aeruginosa isolate 408 genome assembly, contig: 408.NODE_161_length_30969_cov_30.932512, whole genome shotgun sequence

⇒Summary: seq-len = 31025 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8293-18866 bp Zoom in on locus 1 x9 x14 CRISPR array Location: 8293-8811 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8293-8811 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9584-12265 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12268-13836 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 13833-14363 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14373-15515 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15517-16179 bp Gene: pfam08798:cas6e Type: other Location: 16154-16765 bp Gene: cd09719:cas1 Type: universal Location: 16792-17682 bp Gene: pfam09707:cas2 Type: universal Location: 17679-17978 bp CRISPR array Location: 18043-18866 bp Num of repeats: 14 Spacers: s9-s21 CRISPR array Location: 18043-18866 bp Num of repeats: 14 Spacers: s9-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8293-8811 bp]: array | spacers
           [Locus range 18043-18866 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)