CRISPRone

CRISPRone report for GCA_900147415.1_415

♦ Seq 1: FRTM01000018.1 Pseudomonas aeruginosa isolate 415 genome assembly, contig: 415.NODE_20_length_37772_cov_34.864159, whole genome shotgun sequence

⇒Summary: seq-len = 37822 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16558-27002 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 16558-17666 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 16558-17666 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 17926-18900 bp Gene: COG1203:cas3 Type: Type-I Location: 18897-22127 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 22185-23489 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 23476-24459 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 24470-25498 bp Gene: cd09739:cas6f Type: other Location: 25502-26065 bp CRISPR array Location: 26315-27002 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 26315-27002 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 16558-17666 bp]: array | spacers
           [Locus range 26315-27002 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)