CRISPRone

CRISPRone report for GCA_900147425.1_416

♦ Seq 1: FRTJ01000015.1 Pseudomonas aeruginosa isolate 416 genome assembly, contig: 416.NODE_15_length_47982_cov_35.681255, whole genome shotgun sequence

⇒Summary: seq-len = 48032 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36733-47177 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 36733-37421 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 36733-37421 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37670-38233 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38237-39265 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39276-40259 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40246-41550 bp Gene: COG1203:cas3 Type: Type-I Location: 41608-44838 bp Gene: cd09718:cas1 Type: universal Location: 44835-45809 bp CRISPR array Location: 46070-47177 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 46070-47177 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36733-37421 bp]: array | spacers
           [Locus range 46070-47177 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)