CRISPRone

CRISPRone report for GCA_900147435.1_417

♦ Seq 1: FRTO01000046.1 Pseudomonas aeruginosa isolate 417 genome assembly, contig: 417.NODE_49_length_22084_cov_35.994022, whole genome shotgun sequence

⇒Summary: seq-len = 22134 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 856-11300 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 856-1964 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 856-1964 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 2224-3198 bp Gene: COG1203:cas3 Type: Type-I Location: 3195-6425 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6483-7787 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7774-8757 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8768-9796 bp Gene: cd09739:cas6f Type: other Location: 9800-10363 bp CRISPR array Location: 10613-11300 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 10613-11300 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 856-1964 bp]: array | spacers
           [Locus range 10613-11300 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)