CRISPRone

CRISPRone report for GCA_900147515.1_425

♦ Seq 1: FRTW01000019.1 Pseudomonas aeruginosa isolate 425 genome assembly, contig: 425.NODE_19_length_57651_cov_37.801098, whole genome shotgun sequence

⇒Summary: seq-len = 57701 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25615-36168 bp Zoom in on locus 1 x15 x19 CRISPR array Location: 25615-26478 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 25615-26478 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 26661-27224 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 27228-28256 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28267-29250 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 29237-30541 bp Gene: COG1203:cas3 Type: Type-I Location: 30599-33829 bp Gene: cd09718:cas1 Type: universal Location: 33826-34800 bp CRISPR array Location: 35062-36168 bp Num of repeats: 19 Spacers: s15-s32 CRISPR array Location: 35062-36168 bp Num of repeats: 19 Spacers: s15-s32 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25615-26478 bp]: array | spacers
           [Locus range 35062-36168 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRTW01000099.1 Pseudomonas aeruginosa isolate 425 genome assembly, contig: 425.NODE_104_length_46991_cov_39.468197, whole genome shotgun sequence

⇒Summary: seq-len = 47041 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27733-38729 bp Zoom in on locus 1 x18 x12 CRISPR array Location: 27733-28798 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 27733-28798 bp Num of repeats: 18 Spacers: s1-s17 Gene: pfam09707:cas2 Type: universal Location: 28863-29162 bp Gene: cd09719:cas1 Type: universal Location: 29159-30049 bp Gene: pfam08798:cas6e Type: other Location: 30076-30615 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 30662-31324 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 31326-32468 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 32478-33008 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 33005-34573 bp Gene: cd09641:cas3HD Type: Type-I Location: 34576-37257 bp CRISPR array Location: 38030-38729 bp Num of repeats: 12 Spacers: s18-s28 CRISPR array Location: 38030-38729 bp Num of repeats: 12 Spacers: s18-s28 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 27733-28798 bp]: array | spacers
           [Locus range 38030-38729 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)