CRISPRone

CRISPRone report for GCA_900147585.1_432

♦ Seq 1: FRUA01000007.1 Pseudomonas aeruginosa isolate 432 genome assembly, contig: 432.NODE_7_length_162898_cov_33.231766, whole genome shotgun sequence

⇒Summary: seq-len = 162954 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38198-48751 bp Zoom in on locus 1 x15 x19 CRISPR array Location: 38198-39061 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 38198-39061 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 39244-39807 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39811-40839 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40850-41833 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41820-43124 bp Gene: COG1203:cas3 Type: Type-I Location: 43182-46412 bp Gene: cd09718:cas1 Type: universal Location: 46409-47383 bp CRISPR array Location: 47645-48751 bp Num of repeats: 19 Spacers: s15-s32 CRISPR array Location: 47645-48751 bp Num of repeats: 19 Spacers: s15-s32 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38198-39061 bp]: array | spacers
           [Locus range 47645-48751 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRUA01000120.1 Pseudomonas aeruginosa isolate 432 genome assembly, contig: 432.NODE_130_length_31525_cov_38.717209, whole genome shotgun sequence

⇒Summary: seq-len = 31581 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12172-23168 bp Zoom in on locus 1 x18 x12 CRISPR array Location: 12172-13237 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 12172-13237 bp Num of repeats: 18 Spacers: s1-s17 Gene: pfam09707:cas2 Type: universal Location: 13302-13601 bp Gene: cd09719:cas1 Type: universal Location: 13598-14488 bp Gene: pfam08798:cas6e Type: other Location: 14515-15054 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15101-15763 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 15765-16907 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 16917-17447 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 17444-19012 bp Gene: cd09641:cas3HD Type: Type-I Location: 19015-21696 bp CRISPR array Location: 22469-23168 bp Num of repeats: 12 Spacers: s18-s28 CRISPR array Location: 22469-23168 bp Num of repeats: 12 Spacers: s18-s28 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 12172-13237 bp]: array | spacers
           [Locus range 22469-23168 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)