CRISPRone

CRISPRone report for GCA_900147595.1_433

♦ Seq 1: FRTX01000136.1 Pseudomonas aeruginosa isolate 433 genome assembly, contig: 433.NODE_152_length_57842_cov_37.453789, whole genome shotgun sequence

⇒Summary: seq-len = 57886 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25853-36406 bp Zoom in on locus 1 x15 x19 CRISPR array Location: 25853-26716 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 25853-26716 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 26899-27462 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 27466-28494 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28505-29488 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 29475-30779 bp Gene: COG1203:cas3 Type: Type-I Location: 30837-34067 bp Gene: cd09718:cas1 Type: universal Location: 34064-35038 bp CRISPR array Location: 35300-36406 bp Num of repeats: 19 Spacers: s15-s32 CRISPR array Location: 35300-36406 bp Num of repeats: 19 Spacers: s15-s32 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25853-26716 bp]: array | spacers
           [Locus range 35300-36406 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRTX01000038.1 Pseudomonas aeruginosa isolate 433 genome assembly, contig: 433.NODE_40_length_47100_cov_40.468788, whole genome shotgun sequence

⇒Summary: seq-len = 47144 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27748-38744 bp Zoom in on locus 1 x18 x12 CRISPR array Location: 27748-28813 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 27748-28813 bp Num of repeats: 18 Spacers: s1-s17 Gene: pfam09707:cas2 Type: universal Location: 28878-29177 bp Gene: cd09719:cas1 Type: universal Location: 29174-30064 bp Gene: pfam08798:cas6e Type: other Location: 30091-30630 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 30677-31339 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 31341-32483 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 32493-33023 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 33020-34588 bp Gene: cd09641:cas3HD Type: Type-I Location: 34591-37272 bp CRISPR array Location: 38045-38744 bp Num of repeats: 12 Spacers: s18-s28 CRISPR array Location: 38045-38744 bp Num of repeats: 12 Spacers: s18-s28 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 27748-28813 bp]: array | spacers
           [Locus range 38045-38744 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)