CRISPRone

CRISPRone report for GCA_900147605.1_434

♦ Seq 1: FRUC01000144.1 Pseudomonas aeruginosa isolate 434 genome assembly, contig: 434.NODE_149_length_34195_cov_34.299168, whole genome shotgun sequence

⇒Summary: seq-len = 34241 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 15869-17575 bp Zoom in on locus 1 x29 CRISPR array Location: 15869-17575 bp Num of repeats: 29 Spacers: s1-s28 CRISPR array Location: 15869-17575 bp Num of repeats: 29 Spacers: s1-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 15869-17575 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRUC01000267.1 Pseudomonas aeruginosa isolate 434 genome assembly, contig: 434.NODE_320_length_1018_cov_38.856583, whole genome shotgun sequence

⇒Summary: seq-len = 1064 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 96-1023 bp Zoom in on locus 1 x16 CRISPR array Location: 96-1023 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 96-1023 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 96-1023 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRUC01000016.1 Pseudomonas aeruginosa isolate 434 genome assembly, contig: 434.NODE_17_length_34771_cov_32.638866, whole genome shotgun sequence

⇒Summary: seq-len = 34817 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 94-8974 bp Zoom in on locus 1 x3 x3 CRISPR array Location: 94-242 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 94-242 bp Num of repeats: 3 Spacers: s1-s2 Gene: cd09718:cas1 Type: universal Location: 503-1477 bp Gene: COG1203:cas3 Type: Type-I Location: 1474-4704 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4762-6066 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6053-7036 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7047-8075 bp Gene: cd09739:cas6f Type: other Location: 8079-8642 bp CRISPR array Location: 8827-8974 bp Num of repeats: 3 Spacers: s3-s4 CRISPR array Location: 8827-8974 bp Num of repeats: 3 Spacers: s3-s4 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 94-242 bp]: array | spacers
           [Locus range 8827-8974 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)