CRISPRone

CRISPRone report for GCA_900147635.1_437

♦ Seq 1: FRUF01000203.1 Pseudomonas aeruginosa isolate 437 genome assembly, contig: 437.NODE_287_length_1022_cov_42.879646, whole genome shotgun sequence

⇒Summary: seq-len = 1072 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 100-1027 bp Zoom in on locus 1 x16 CRISPR array Location: 100-1027 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 100-1027 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 100-1027 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRUF01000152.1 Pseudomonas aeruginosa isolate 437 genome assembly, contig: 437.NODE_172_length_33997_cov_38.916729, whole genome shotgun sequence

⇒Summary: seq-len = 34047 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16677-18144 bp Zoom in on locus 1 x25 CRISPR array Location: 16677-18144 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 16677-18144 bp Num of repeats: 25 Spacers: s1-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 16677-18144 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRUF01000208.1 Pseudomonas aeruginosa isolate 437 genome assembly, contig: 437.NODE_320_length_47467_cov_33.596077, whole genome shotgun sequence

⇒Summary: seq-len = 47517 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38540-47420 bp Zoom in on locus 1 x3 x3 CRISPR array Location: 38540-38688 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 38540-38688 bp Num of repeats: 3 Spacers: s1-s2 Gene: cd09739:cas6f Type: other Location: 38872-39435 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39439-40467 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40478-41461 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41448-42752 bp Gene: COG1203:cas3 Type: Type-I Location: 42810-46040 bp Gene: cd09718:cas1 Type: universal Location: 46037-47011 bp CRISPR array Location: 47273-47420 bp Num of repeats: 3 Spacers: s3-s4 CRISPR array Location: 47273-47420 bp Num of repeats: 3 Spacers: s3-s4 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38540-38688 bp]: array | spacers
           [Locus range 47273-47420 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)