CRISPRone

CRISPRone report for GCA_900147655.1_439

♦ Seq 1: FRUH01000194.1 Pseudomonas aeruginosa isolate 439 genome assembly, contig: 439.NODE_208_length_1022_cov_50.753426, whole genome shotgun sequence

⇒Summary: seq-len = 1072 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 46-974 bp Zoom in on locus 1 x16 CRISPR array Location: 46-974 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 46-974 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 46-974 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRUH01000323.1 Pseudomonas aeruginosa isolate 439 genome assembly, contig: 439.NODE_374_length_21952_cov_42.846848, whole genome shotgun sequence

⇒Summary: seq-len = 22002 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 98-8978 bp Zoom in on locus 1 x3 x3 CRISPR array Location: 98-246 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 98-246 bp Num of repeats: 3 Spacers: s1-s2 Gene: cd09718:cas1 Type: universal Location: 507-1481 bp Gene: COG1203:cas3 Type: Type-I Location: 1478-4708 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4766-6070 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6057-7040 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7051-8079 bp Gene: cd09739:cas6f Type: other Location: 8083-8646 bp CRISPR array Location: 8831-8978 bp Num of repeats: 3 Spacers: s3-s4 CRISPR array Location: 8831-8978 bp Num of repeats: 3 Spacers: s3-s4 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 98-246 bp]: array | spacers
           [Locus range 8831-8978 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRUH01000358.1 Pseudomonas aeruginosa isolate 439 genome assembly, contig: 439.NODE_448_length_14187_cov_42.759781, whole genome shotgun sequence

⇒Summary: seq-len = 14237 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 607-2134 bp Zoom in on locus 1 x26 CRISPR array Location: 607-2134 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 607-2134 bp Num of repeats: 26 Spacers: s1-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 607-2134 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)