CRISPRone

CRISPRone report for GCA_900147685.1_11_2

♦ Seq 1: FRUK01000214.1 Pseudomonas aeruginosa isolate 11-2 genome assembly, contig: 11_2.NODE_275_length_23370_cov_38.067566, whole genome shotgun sequence

⇒Summary: seq-len = 23416 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 262-10320 bp Zoom in on locus 1 x10 x10 CRISPR array Location: 262-830 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 262-830 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1081-2055 bp Gene: COG1203:cas3 Type: Type-I Location: 2052-5282 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5693-6994 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6981-7964 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7975-9003 bp Gene: cd09739:cas6f Type: other Location: 9007-9570 bp CRISPR array Location: 9754-10320 bp Num of repeats: 10 Spacers: s10-s18 CRISPR array Location: 9754-10320 bp Num of repeats: 10 Spacers: s10-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 262-830 bp]: array | spacers
           [Locus range 9754-10320 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRUK01000197.1 Pseudomonas aeruginosa isolate 11-2 genome assembly, contig: 11_2.NODE_230_length_32412_cov_48.121128, whole genome shotgun sequence

⇒Summary: seq-len = 32458 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 15856-21303 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 15856-16725 bp Gene: unk Type: unknown Location: 17066-17278 bp Gene: unk Type: unknown Location: 17384-19522 bp Gene: cls000038:cas7 Type: Subtype-I-B Location: 19519-21303 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRUK01000289.1 Pseudomonas aeruginosa isolate 11-2 genome assembly, contig: 11_2.NODE_527_length_16977_cov_40.341640, whole genome shotgun sequence

⇒Summary: seq-len = 17023 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16192-16760 bp Zoom in on locus 1 x10 CRISPR array Location: 16192-16760 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 16192-16760 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 16192-16760 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)