CRISPRone

CRISPRone report for GCA_900147755.1_14_1

♦ Seq 1: FRUR01000036.1 Pseudomonas aeruginosa isolate 14.1 genome assembly, contig: 14.1.NODE_44_length_156594_cov_50.004749, whole genome shotgun sequence

⇒Summary: seq-len = 156644 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 132045-140785 bp Zoom in on locus 1 Gene: cd09639:cas3 Type: Type-I Location: 132045-134411 bp Gene: cls000038:cas7 Type: Subtype-I-B Location: 135338-136558 bp Gene: unk Type: unknown Location: 137119-139257 bp Gene: unk Type: unknown Location: 139432-139575 bp Gene: pfam13280:WYL Type: other Location: 139916-140785 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRUR01000047.1 Pseudomonas aeruginosa isolate 14.1 genome assembly, contig: 14.1.NODE_58_length_172789_cov_45.531296, whole genome shotgun sequence

⇒Summary: seq-len = 172839 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 172004-172572 bp Zoom in on locus 1 x10 CRISPR array Location: 172004-172572 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 172004-172572 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 172004-172572 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRUR01000030.1 Pseudomonas aeruginosa isolate 14.1 genome assembly, contig: 14.1.NODE_34_length_35830_cov_45.978622, whole genome shotgun sequence

⇒Summary: seq-len = 35880 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 266-10324 bp Zoom in on locus 1 x10 x10 CRISPR array Location: 266-834 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 266-834 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1085-2059 bp Gene: COG1203:cas3 Type: Type-I Location: 2056-5286 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5697-6998 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6985-7968 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7979-9007 bp Gene: cd09739:cas6f Type: other Location: 9011-9574 bp CRISPR array Location: 9758-10324 bp Num of repeats: 10 Spacers: s10-s18 CRISPR array Location: 9758-10324 bp Num of repeats: 10 Spacers: s10-s18 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 266-834 bp]: array | spacers
           [Locus range 9758-10324 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)