CRISPRone

CRISPRone report for GCA_900147785.1_15_2

♦ Seq 1: FRUW01000084.1 Pseudomonas aeruginosa isolate 15-2 genome assembly, contig: 15_2.NODE_97_length_23359_cov_24.583286, whole genome shotgun sequence

⇒Summary: seq-len = 23403 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13086-23144 bp Zoom in on locus 1 x10 x10 CRISPR array Location: 13086-13653 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 13086-13653 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09739:cas6f Type: other Location: 13836-14399 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 14403-15431 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 15442-16425 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 16412-17713 bp Gene: COG1203:cas3 Type: Type-I Location: 18124-21354 bp Gene: cd09718:cas1 Type: universal Location: 21351-22325 bp CRISPR array Location: 22577-23144 bp Num of repeats: 10 Spacers: s10-s18 CRISPR array Location: 22577-23144 bp Num of repeats: 10 Spacers: s10-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 13086-13653 bp]: array | spacers
           [Locus range 22577-23144 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRUW01000258.1 Pseudomonas aeruginosa isolate 15-2 genome assembly, contig: 15_2.NODE_314_length_32415_cov_31.476507, whole genome shotgun sequence

⇒Summary: seq-len = 32459 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 15854-21301 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 15854-16723 bp Gene: unk Type: unknown Location: 17064-17276 bp Gene: unk Type: unknown Location: 17382-19520 bp Gene: cls000038:cas7 Type: Subtype-I-B Location: 19517-21301 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRUW01000377.1 Pseudomonas aeruginosa isolate 15-2 genome assembly, contig: 15_2.NODE_654_length_16948_cov_24.250530, whole genome shotgun sequence

⇒Summary: seq-len = 16992 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 262-831 bp Zoom in on locus 1 x10 CRISPR array Location: 262-831 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 262-831 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 262-831 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)