CRISPRone

CRISPRone report for GCA_900147795.1_161_1

♦ Seq 1: FRUU01000059.1 Pseudomonas aeruginosa isolate 161.1 genome assembly, contig: 161_1.NODE_84_length_70598_cov_56.715458, whole genome shotgun sequence

⇒Summary: seq-len = 70646 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23894-34338 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 23894-24582 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 23894-24582 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 24831-25394 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 25398-26426 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26437-27420 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27407-28711 bp Gene: COG1203:cas3 Type: Type-I Location: 28769-31999 bp Gene: cd09718:cas1 Type: universal Location: 31996-32970 bp CRISPR array Location: 33231-34338 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 33231-34338 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 23894-24582 bp]: array | spacers
           [Locus range 33231-34338 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)