CRISPRone

CRISPRone report for GCA_900147805.1_163_1

♦ Seq 1: FRUT01000151.1 Pseudomonas aeruginosa isolate 163.1 genome assembly, contig: 163_1.NODE_257_length_67319_cov_46.262497, whole genome shotgun sequence

⇒Summary: seq-len = 67363 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23893-34337 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 23893-24581 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 23893-24581 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 24830-25393 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 25397-26425 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26436-27419 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27406-28710 bp Gene: COG1203:cas3 Type: Type-I Location: 28768-31998 bp Gene: cd09718:cas1 Type: universal Location: 31995-32969 bp CRISPR array Location: 33230-34337 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 33230-34337 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 23893-24581 bp]: array | spacers
           [Locus range 33230-34337 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)